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Logic Programming
This book constitutes the refereed proceedings of the 19th International Conference on Logic Programming, ICLP 2003, held in Mumbai, India in December 2003. The 23 revised full papers and 19 poster papers presented together with 5 invited full contributions and abstracts of 4 invited contributions were carefully reviewed and selected from 81 submissions. All current issues in logic programming are addressed.
Evolutionary Biology of Tumor Initiation and Progression
Cancer is characterized by heterogeneous cells with capacity for self renewal, and selective pressures in the microenvironment which constantly change the cell population. This "descent with modification" is consistent with Darwin's definition of evolution, and accordingly, cancer progression can be captured from an evolutionary angle. However, there is also a clear difference between cancer progression and biological evolution. First, contrary to the evolution of complex organisms, cancer originates from cells of multicellular organisms that escape their constraints and behave like unicellular organisms. Therefore, from the beginning, cancer cells have complex genomes that contain abundant genetic materials which they can use to change their phenotype by dynamic rearrangements and modifications. Secondly, epigenetic effects promote cancer evolution in contrast to the evolution of life. Some tumors develop with minimal genetic alterations, and cell plasticity contributes to both initiation and progression in various tumors. However, an evolutionary theory that encompasses these characteristics of cancer remains to be developed.
Evolutionary Genomics and Systems Biology
A comprehensive, authoritative look at an emergent area in post-genomic science, Evolutionary genomics is an up-and-coming, complex field that attempts to explain the biocomplexity of the living world. Evolutionary Genomics and Systems Biology is the first full-length book to blend established and emerging concepts in bioinformatics, evolution, genomics, and structural biology, with the integrative views of network and systems biology. Three key aspects of evolutionary genomics and systems biology are covered in clear detail: the study of genomic history, i.e., understanding organismal evolution at the genomic level; the study of macromolecular complements, which encompasses the evolution of...
Evolution after Gene Duplication
Gene duplication has long been believed to have played a major role in the rise of biological novelty through evolution of new function and gene expression patterns. The first book to examine gene duplication across all levels of biological organization, Evolution after Gene Duplication presents a comprehensive picture of the mechanistic process by which gene duplication may have played a role in generating biodiversity. Key Features: Explores comparative genomics, genome evolution studies and analysis of multi-gene families such as Hox, globins, olfactory receptors and MHC (immune system) A complete post-genome treatment of the topic originally covered by Ohno's 1970 classic, this volume ex...
Biocomputing '97 - Proceedings Of The Pacific Symposium
The Pacific Symposium on Biocomputing (PSB) is an international, multidisciplinary conference for the presentation and discussion of current research in the theory and application of computational methods in problems of biological significance. Papers and presentations are rigorously peer-reviewed and are published in an archival volume that will prove to be a valuable reference for all biochemists and computer scientists.PSB-97 will focus on rapidly advancing areas of research in the field.
Evolutionary Dynamics
The 14 chapters of this volume, which present an overview of new research in evolutionary dynamics, were first presented at a conference held in October 1998 at the Santa Fe Institute. The main divisions of the book are macroevolution; epochal evolution; population genetics, dynamics, and optimization; and evolution of cooperation. Individual topics include spectral landscape theory, external triggers in biological evolution, and evolutionary dynamics of asexual reproduction. Several of the contributors, like the editors, are affiliated with the Sante Fe Institute; others teach or work in physics, genetics, biology, computational neuroscience, and theoretical chemistry at universities and private institutions in the US, UK, Austria, Sweden, Australia, Israel, and Germany. Annotation copyrighted by Book News, Inc., Portland, OR
Molecular Biology and Pathogenicity of Mycoplasmas
was the result of the efforts of Robert Cleverdon. The rapidly developing discipline of molecular biology and the rapidly expanding knowledge of the PPLO were brought together at this meeting. In addition to the PPLO specialists, the conference invited Julius Marmur to compare PPLO DNA to DNA of other organisms; David Garfinkel, who was one of the first to develop computer models of metabolism; Cyrus Levinthal to talk about coding; and Henry Quastler to discuss information theory constraints on very small cells. The conference was an announcement of the role of PPLO in the fundamental understanding of molecular biology. Looking back 40-some years to the Connecticut meeting, it was a rather b...
Biological Networks
This volume presents a timely and comprehensive overview of biological networks at all organization levels in the spirit of the complex system approach. It discusses the transversal issues and fundamental principles as well as the overall structure, dynamics, and modeling of a wide array of biological networks at the molecular, cellular, and population levels. Anchored in both empirical data and a strong theoretical background, the book therefore lends valuable credence to the complex systems approach.
Higher-Order Components for Grid Programming
A major challenge in grid computing remains the application software development for this new kind of infrastructure. Grid application programmers have to take into account several complicated aspects: distribution of data and computations, parallel computations on different sites and processors, heterogeneity of the involved computers, load balancing, etc. Grid programmers thus demand novel programming methodologies that abstract over such technical details while preserving the beneficial features of modern grid middleware. For this purpose, the authors introduce Higher-Order Components (HOCs). HOCs implement generic parallel/distributed processing patterns, together with the required middl...
